Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.22□□□□□ -0.13
Col10a1Q05306 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.22□□□□□ -0.13
Col10a1Q05306 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.22□□□□□ -0.13
Col10a1Q05306 Gm18195-201ENSMUST00000207604 706 ntBASIC14.22□□□□□ -0.13
Col10a1Q05306 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.22□□□□□ -0.13
Col10a1Q05306 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.22□□□□□ -0.13
Col10a1Q05306 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.22□□□□□ -0.13
Col10a1Q05306 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col10a1Q05306 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col10a1Q05306 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col10a1Q05306 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Col10a1Q05306 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Col10a1Q05306 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col10a1Q05306 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.21□□□□□ -0.13
Col10a1Q05306 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Col10a1Q05306 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col10a1Q05306 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Gm7222-201ENSMUST00000117512 906 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Mir5131-201ENSMUST00000175426 93 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Gm6550-201ENSMUST00000187574 993 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.2□□□□□ -0.14
Col10a1Q05306 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.2□□□□□ -0.14
Col10a1Q05306 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col10a1Q05306 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.2□□□□□ -0.14
Col10a1Q05306 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.19□□□□□ -0.14
Col10a1Q05306 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.19□□□□□ -0.14
Col10a1Q05306 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col10a1Q05306 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col10a1Q05306 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms