Protein–RNA interactions for Protein: P81067

Irx3, Iroquois-class homeodomain protein IRX-3, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irx3P81067 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx3P81067 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Irx3P81067 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Irx3P81067 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.43■□□□□ 0.7
Irx3P81067 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.43■□□□□ 0.7
Irx3P81067 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.43■□□□□ 0.7
Irx3P81067 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx3P81067 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx3P81067 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Irx3P81067 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx3P81067 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irx3P81067 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Irx3P81067 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Irx3P81067 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.42■□□□□ 0.7
Irx3P81067 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Gm37935-201ENSMUST00000192012 982 ntBASIC19.42■□□□□ 0.7
Irx3P81067 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irx3P81067 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Irx3P81067 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx3P81067 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.41■□□□□ 0.7
Irx3P81067 Gm27867-201ENSMUST00000184778 125 ntBASIC19.41■□□□□ 0.7
Irx3P81067 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx3P81067 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Irx3P81067 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx3P81067 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.41■□□□□ 0.7
Irx3P81067 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irx3P81067 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Irx3P81067 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Gm45605-201ENSMUST00000210265 4269 ntBASIC19.4■□□□□ 0.7
Irx3P81067 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Irx3P81067 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.4■□□□□ 0.7
Irx3P81067 Gm18421-201ENSMUST00000204122 625 ntBASIC19.4■□□□□ 0.7
Irx3P81067 Gm6376-201ENSMUST00000209407 580 ntBASIC19.4■□□□□ 0.7
Irx3P81067 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Irx3P81067 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Irx3P81067 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irx3P81067 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.4■□□□□ 0.7
Irx3P81067 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Irx3P81067 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.39■□□□□ 0.7
Irx3P81067 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.39■□□□□ 0.7
Irx3P81067 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irx3P81067 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Irx3P81067 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Mir5131-201ENSMUST00000175426 93 ntBASIC19.39■□□□□ 0.69
Irx3P81067 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.39■□□□□ 0.69
Irx3P81067 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Irx3P81067 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Irx3P81067 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irx3P81067 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms