Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrkcbP68404 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PrkcbP68404 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PrkcbP68404 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.64■□□□□ 0.25
PrkcbP68404 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PrkcbP68404 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PrkcbP68404 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Mir3113-201ENSMUST00000175478 76 ntBASIC16.64■□□□□ 0.25
PrkcbP68404 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.64■□□□□ 0.25
PrkcbP68404 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.64■□□□□ 0.25
PrkcbP68404 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.64■□□□□ 0.25
PrkcbP68404 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PrkcbP68404 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PrkcbP68404 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrkcbP68404 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.63■□□□□ 0.25
PrkcbP68404 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.63■□□□□ 0.25
PrkcbP68404 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.63■□□□□ 0.25
PrkcbP68404 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.63■□□□□ 0.25
PrkcbP68404 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Gm37935-201ENSMUST00000192012 982 ntBASIC16.63■□□□□ 0.25
PrkcbP68404 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.63■□□□□ 0.25
PrkcbP68404 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PrkcbP68404 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.63■□□□□ 0.25
PrkcbP68404 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrkcbP68404 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PrkcbP68404 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.62■□□□□ 0.25
PrkcbP68404 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.62■□□□□ 0.25
PrkcbP68404 Mir8117-201ENSMUST00000184773 107 ntBASIC16.62■□□□□ 0.25
PrkcbP68404 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PrkcbP68404 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.62■□□□□ 0.25
PrkcbP68404 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
PrkcbP68404 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PrkcbP68404 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkcbP68404 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.61■□□□□ 0.25
PrkcbP68404 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.61■□□□□ 0.25
PrkcbP68404 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
PrkcbP68404 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.61■□□□□ 0.25
PrkcbP68404 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.61■□□□□ 0.25
PrkcbP68404 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.61■□□□□ 0.25
PrkcbP68404 Gm4995-201ENSMUST00000117247 432 ntBASIC16.61■□□□□ 0.25
PrkcbP68404 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.61■□□□□ 0.25
PrkcbP68404 Gm2213-201ENSMUST00000197485 688 ntBASIC16.61■□□□□ 0.25
PrkcbP68404 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.61■□□□□ 0.25
PrkcbP68404 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkcbP68404 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms