Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Rps28P62858 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.12□□□□□ -0.95
Rps28P62858 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rps28P62858 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.12□□□□□ -0.95
Rps28P62858 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rps28P62858 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rps28P62858 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC9.11□□□□□ -0.95
Rps28P62858 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rps28P62858 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Rps28P62858 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.11□□□□□ -0.95
Rps28P62858 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rps28P62858 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rps28P62858 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.1□□□□□ -0.95
Rps28P62858 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Rps28P62858 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.1□□□□□ -0.95
Rps28P62858 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Acot6-202ENSMUST00000222921 3622 ntBASIC9.1□□□□□ -0.95
Rps28P62858 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.1□□□□□ -0.95
Rps28P62858 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms