Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cks1bP61025 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.03□□□□□ -0.64
Cks1bP61025 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1bP61025 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.02□□□□□ -0.65
Cks1bP61025 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Cks1bP61025 Gm7638-201ENSMUST00000121348 967 ntBASIC11.02□□□□□ -0.65
Cks1bP61025 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1bP61025 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.02□□□□□ -0.65
Cks1bP61025 Gm20049-201ENSMUST00000219950 730 ntBASIC11.02□□□□□ -0.65
Cks1bP61025 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1bP61025 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.02□□□□□ -0.65
Cks1bP61025 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1bP61025 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.02□□□□□ -0.65
Cks1bP61025 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.02□□□□□ -0.65
Cks1bP61025 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cks1bP61025 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cks1bP61025 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1bP61025 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Cks1bP61025 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cks1bP61025 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11□□□□□ -0.65
Cks1bP61025 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1bP61025 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cks1bP61025 Gm12441-201ENSMUST00000121806 588 ntBASIC11□□□□□ -0.65
Cks1bP61025 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cks1bP61025 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms