Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.78□□□□□ -0.04
Cdkn2bP55271 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.78□□□□□ -0.04
Cdkn2bP55271 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.78□□□□□ -0.04
Cdkn2bP55271 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdkn2bP55271 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdkn2bP55271 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.77□□□□□ -0.05
Cdkn2bP55271 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdkn2bP55271 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Rprl3-201ENSMUST00000157400 290 ntBASIC14.76□□□□□ -0.05
Cdkn2bP55271 Mir3081-201ENSMUST00000175305 84 ntBASIC14.76□□□□□ -0.05
Cdkn2bP55271 Gm19164-201ENSMUST00000210667 640 ntBASIC14.76□□□□□ -0.05
Cdkn2bP55271 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdkn2bP55271 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdkn2bP55271 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdkn2bP55271 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms