Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gm13436-201ENSMUST00000120418 567 ntBASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.82□□□□□ -0.36
Nkx2-1P50220 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.82□□□□□ -0.36
Nkx2-1P50220 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-1P50220 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-1P50220 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gm13559-201ENSMUST00000120476 863 ntBASIC12.8□□□□□ -0.36
Nkx2-1P50220 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gm7370-201ENSMUST00000219471 767 ntBASIC12.8□□□□□ -0.36
Nkx2-1P50220 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.8□□□□□ -0.36
Nkx2-1P50220 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-1P50220 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-1P50220 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms