Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Gm11175-201ENSMUST00000116172 543 ntBASIC10.06□□□□□ -0.8
Xcl1P47993 Gm13146-201ENSMUST00000118508 780 ntBASIC10.06□□□□□ -0.8
Xcl1P47993 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC10.06□□□□□ -0.8
Xcl1P47993 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Xcl1P47993 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Xcl1P47993 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.06□□□□□ -0.8
Xcl1P47993 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Xcl1P47993 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Xcl1P47993 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Xcl1P47993 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC10.05□□□□□ -0.8
Xcl1P47993 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC10.05□□□□□ -0.8
Xcl1P47993 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Xcl1P47993 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.05□□□□□ -0.8
Xcl1P47993 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Xcl1P47993 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.05□□□□□ -0.8
Xcl1P47993 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.05□□□□□ -0.8
Xcl1P47993 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.05□□□□□ -0.8
Xcl1P47993 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.05□□□□□ -0.8
Xcl1P47993 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Xcl1P47993 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.04□□□□□ -0.8
Xcl1P47993 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.04□□□□□ -0.8
Xcl1P47993 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Xcl1P47993 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Xcl1P47993 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms