Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.25■□□□□ 0.19
HttP42859 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.25■□□□□ 0.19
HttP42859 Mir1897-201ENSMUST00000122581 272 ntBASIC16.25■□□□□ 0.19
HttP42859 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.25■□□□□ 0.19
HttP42859 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HttP42859 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.25■□□□□ 0.19
HttP42859 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HttP42859 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HttP42859 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HttP42859 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.24■□□□□ 0.19
HttP42859 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HttP42859 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.24■□□□□ 0.19
HttP42859 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.24■□□□□ 0.19
HttP42859 Gm9797-201ENSMUST00000052902 613 ntBASIC16.24■□□□□ 0.19
HttP42859 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HttP42859 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HttP42859 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HttP42859 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.24■□□□□ 0.19
HttP42859 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HttP42859 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HttP42859 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HttP42859 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HttP42859 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.23■□□□□ 0.19
HttP42859 Gm17420-201ENSMUST00000164753 153 ntBASIC16.23■□□□□ 0.19
HttP42859 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.23■□□□□ 0.19
HttP42859 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.23■□□□□ 0.19
HttP42859 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
HttP42859 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Snora78-201ENSMUST00000158630 128 ntBASIC16.23■□□□□ 0.19
HttP42859 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HttP42859 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.23■□□□□ 0.19
HttP42859 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HttP42859 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HttP42859 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HttP42859 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HttP42859 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HttP42859 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.22■□□□□ 0.19
HttP42859 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.22■□□□□ 0.19
HttP42859 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.22■□□□□ 0.19
HttP42859 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HttP42859 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.21■□□□□ 0.19
HttP42859 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.21■□□□□ 0.19
HttP42859 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HttP42859 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HttP42859 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HttP42859 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.21■□□□□ 0.19
HttP42859 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HttP42859 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HttP42859 Gm27701-201ENSMUST00000184498 110 ntBASIC16.21■□□□□ 0.18
HttP42859 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.21■□□□□ 0.18
HttP42859 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HttP42859 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HttP42859 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
HttP42859 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HttP42859 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.2■□□□□ 0.18
HttP42859 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HttP42859 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms