Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-2P42580 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.98■□□□□ 0.63
Nkx1-2P42580 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.98■□□□□ 0.63
Nkx1-2P42580 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx1-2P42580 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.98■□□□□ 0.63
Nkx1-2P42580 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.97■□□□□ 0.63
Nkx1-2P42580 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx1-2P42580 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm8825-201ENSMUST00000182565 998 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm4518-201ENSMUST00000182638 718 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.96■□□□□ 0.63
Nkx1-2P42580 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx1-2P42580 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx1-2P42580 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms