Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdh4P39038 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh4P39038 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.75□□□□□ -0.05
Cdh4P39038 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdh4P39038 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdh4P39038 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdh4P39038 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.75□□□□□ -0.05
Cdh4P39038 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdh4P39038 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.75□□□□□ -0.05
Cdh4P39038 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdh4P39038 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cdh4P39038 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdh4P39038 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.74□□□□□ -0.05
Cdh4P39038 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdh4P39038 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdh4P39038 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdh4P39038 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.74□□□□□ -0.05
Cdh4P39038 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.74□□□□□ -0.05
Cdh4P39038 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.74□□□□□ -0.05
Cdh4P39038 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdh4P39038 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Cdh4P39038 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdh4P39038 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.74□□□□□ -0.05
Cdh4P39038 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.74□□□□□ -0.05
Cdh4P39038 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdh4P39038 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdh4P39038 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdh4P39038 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.73□□□□□ -0.05
Cdh4P39038 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Cdh4P39038 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Grk6-207ENSMUST00000225925 2769 ntBASIC14.73□□□□□ -0.05
Cdh4P39038 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Cdh4P39038 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdh4P39038 Mir5126-201ENSMUST00000175513 77 ntBASIC14.73□□□□□ -0.05
Cdh4P39038 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Cdh4P39038 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.73□□□□□ -0.05
Cdh4P39038 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdh4P39038 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms