Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxa1P35582 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxa1P35582 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxa1P35582 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.25□□□□□ -0.13
Foxa1P35582 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Foxa1P35582 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Foxa1P35582 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxa1P35582 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Foxa1P35582 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.25□□□□□ -0.13
Foxa1P35582 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Gm5682-201ENSMUST00000173402 505 ntBASIC14.25□□□□□ -0.13
Foxa1P35582 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxa1P35582 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxa1P35582 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxa1P35582 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
Foxa1P35582 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.24□□□□□ -0.13
Foxa1P35582 Mir5131-201ENSMUST00000175426 93 ntBASIC14.24□□□□□ -0.13
Foxa1P35582 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.24□□□□□ -0.13
Foxa1P35582 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.24□□□□□ -0.13
Foxa1P35582 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Foxa1P35582 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Foxa1P35582 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxa1P35582 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Foxa1P35582 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.23□□□□□ -0.13
Foxa1P35582 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.23□□□□□ -0.13
Foxa1P35582 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxa1P35582 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxa1P35582 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Foxa1P35582 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Foxa1P35582 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Foxa1P35582 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxa1P35582 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms