Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.31□□□□□ -0.28
Slc6a1P31648 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Slc6a1P31648 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc6a1P31648 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Gm7638-201ENSMUST00000121348 967 ntBASIC13.3□□□□□ -0.28
Slc6a1P31648 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Gm18101-201ENSMUST00000215769 548 ntBASIC13.3□□□□□ -0.28
Slc6a1P31648 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc6a1P31648 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc6a1P31648 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Gm18958-201ENSMUST00000174258 762 ntBASIC13.29□□□□□ -0.28
Slc6a1P31648 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc6a1P31648 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc6a1P31648 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms