Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Thoc7-209ENSMUST00000225325 765 ntBASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Psmb5-202ENSMUST00000227257 622 ntBASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ly6c1P0CW02 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm14722-201ENSMUST00000118943 689 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm8318-201ENSMUST00000182954 872 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm43514-201ENSMUST00000198852 424 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ly6c1P0CW02 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.85□□□□□ -0.35
Ly6c1P0CW02 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ly6c1P0CW02 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms