Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ApoeP08226 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ApoeP08226 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.6□□□□□ -0.07
ApoeP08226 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.6□□□□□ -0.07
ApoeP08226 Gm27389-201ENSMUST00000183622 195 ntBASIC14.6□□□□□ -0.07
ApoeP08226 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.6□□□□□ -0.07
ApoeP08226 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.6□□□□□ -0.07
ApoeP08226 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ApoeP08226 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ApoeP08226 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ApoeP08226 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.59□□□□□ -0.07
ApoeP08226 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ApoeP08226 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.59□□□□□ -0.07
ApoeP08226 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.59□□□□□ -0.07
ApoeP08226 Gm13559-201ENSMUST00000120476 863 ntBASIC14.59□□□□□ -0.07
ApoeP08226 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.59□□□□□ -0.07
ApoeP08226 Gm45058-201ENSMUST00000205810 766 ntBASIC14.59□□□□□ -0.07
ApoeP08226 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.59□□□□□ -0.07
ApoeP08226 Gm10812-201ENSMUST00000099864 546 ntBASIC14.59□□□□□ -0.07
ApoeP08226 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.59□□□□□ -0.07
ApoeP08226 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.59□□□□□ -0.07
ApoeP08226 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ApoeP08226 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.58□□□□□ -0.07
ApoeP08226 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
ApoeP08226 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ApoeP08226 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ApoeP08226 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ApoeP08226 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.58□□□□□ -0.08
ApoeP08226 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Gm9987-201ENSMUST00000069768 567 ntBASIC14.58□□□□□ -0.08
ApoeP08226 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.58□□□□□ -0.08
ApoeP08226 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ApoeP08226 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.58□□□□□ -0.08
ApoeP08226 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ApoeP08226 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ApoeP08226 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ApoeP08226 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.57□□□□□ -0.08
ApoeP08226 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ApoeP08226 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
ApoeP08226 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms