Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxa3P02831 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.94□□□□□ -0.34
Hoxa3P02831 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Hoxa3P02831 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa3P02831 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Gm5867-201ENSMUST00000063197 592 ntBASIC12.93□□□□□ -0.34
Hoxa3P02831 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa3P02831 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa3P02831 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxa3P02831 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm8000-201ENSMUST00000188378 592 ntBASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxa3P02831 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.92□□□□□ -0.34
Hoxa3P02831 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxa3P02831 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa3P02831 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms