Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Col4a1P02463 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a1P02463 Gm43767-201ENSMUST00000198933 381 ntBASIC18.76■□□□□ 0.59
Col4a1P02463 Gm5186-201ENSMUST00000218781 920 ntBASIC18.76■□□□□ 0.59
Col4a1P02463 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a1P02463 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a1P02463 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Col4a1P02463 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.75■□□□□ 0.59
Col4a1P02463 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a1P02463 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.75■□□□□ 0.59
Col4a1P02463 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col4a1P02463 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col4a1P02463 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a1P02463 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.74■□□□□ 0.59
Col4a1P02463 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a1P02463 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Gm27680-201ENSMUST00000184192 160 ntBASIC18.74■□□□□ 0.59
Col4a1P02463 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col4a1P02463 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col4a1P02463 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a1P02463 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a1P02463 Gm27430-201ENSMUST00000184585 107 ntBASIC18.73■□□□□ 0.59
Col4a1P02463 Gm44333-201ENSMUST00000197168 107 ntBASIC18.73■□□□□ 0.59
Col4a1P02463 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Celf4-206ENSMUST00000224553 1729 ntBASIC18.73■□□□□ 0.59
Col4a1P02463 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Gm5866-201ENSMUST00000177881 973 ntBASIC18.73■□□□□ 0.59
Col4a1P02463 Gm27533-201ENSMUST00000183800 152 ntBASIC18.73■□□□□ 0.59
Col4a1P02463 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.73■□□□□ 0.59
Col4a1P02463 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a1P02463 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col4a1P02463 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 Mir6977-201ENSMUST00000184960 64 ntBASIC18.72■□□□□ 0.59
Col4a1P02463 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.72■□□□□ 0.59
Col4a1P02463 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Gm9063-201ENSMUST00000223299 582 ntBASIC18.72■□□□□ 0.59
Col4a1P02463 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.72■□□□□ 0.59
Col4a1P02463 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.72■□□□□ 0.59
Col4a1P02463 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.72■□□□□ 0.59
Col4a1P02463 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a1P02463 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col4a1P02463 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.71■□□□□ 0.59
Col4a1P02463 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Gm13453-201ENSMUST00000118708 357 ntBASIC18.71■□□□□ 0.59
Col4a1P02463 Gm11543-201ENSMUST00000120758 370 ntBASIC18.71■□□□□ 0.59
Col4a1P02463 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.71■□□□□ 0.59
Col4a1P02463 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col4a1P02463 Gm38225-201ENSMUST00000194001 393 ntBASIC18.71■□□□□ 0.59
Col4a1P02463 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col4a1P02463 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms