Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.91□□□□□ -0.66
Hbb-b1P02088 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hbb-b1P02088 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.9□□□□□ -0.66
Hbb-b1P02088 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.9□□□□□ -0.66
Hbb-b1P02088 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hbb-b1P02088 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hbb-b1P02088 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Hbb-b1P02088 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Hbb-b1P02088 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hbb-b1P02088 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Hbb-b1P02088 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm27454-201ENSMUST00000185090 204 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm7291-201ENSMUST00000199147 382 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.89□□□□□ -0.67
Hbb-b1P02088 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hbb-b1P02088 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hbb-b1P02088 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms