Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm27704-201ENSMUST00000185094 107 ntBASIC10.94□□□□□ -0.66
Sh2d1aO88890 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh2d1aO88890 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Gm14859-201ENSMUST00000117752 357 ntBASIC10.93□□□□□ -0.66
Sh2d1aO88890 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Gm33142-201ENSMUST00000193913 867 ntBASIC10.93□□□□□ -0.66
Sh2d1aO88890 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.93□□□□□ -0.66
Sh2d1aO88890 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh2d1aO88890 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.92□□□□□ -0.66
Sh2d1aO88890 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Gm13312-201ENSMUST00000119631 718 ntBASIC10.92□□□□□ -0.66
Sh2d1aO88890 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.92□□□□□ -0.66
Sh2d1aO88890 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.92□□□□□ -0.66
Sh2d1aO88890 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh2d1aO88890 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh2d1aO88890 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms