Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.52■□□□□ 0.24
Cpsf2O35218 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cpsf2O35218 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpsf2O35218 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Gm25406-201ENSMUST00000157599 105 ntBASIC16.52■□□□□ 0.24
Cpsf2O35218 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.52■□□□□ 0.24
Cpsf2O35218 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.52■□□□□ 0.24
Cpsf2O35218 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.52■□□□□ 0.24
Cpsf2O35218 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf2O35218 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cpsf2O35218 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cpsf2O35218 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf2O35218 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf2O35218 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf2O35218 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Gm7367-201ENSMUST00000057611 492 ntBASIC16.51■□□□□ 0.23
Cpsf2O35218 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.51■□□□□ 0.23
Cpsf2O35218 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 Grk6-207ENSMUST00000225925 2769 ntBASIC16.51■□□□□ 0.23
Cpsf2O35218 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cpsf2O35218 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf2O35218 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf2O35218 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.5■□□□□ 0.23
Cpsf2O35218 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf2O35218 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cpsf2O35218 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cpsf2O35218 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.5■□□□□ 0.23
Cpsf2O35218 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.5■□□□□ 0.23
Cpsf2O35218 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpsf2O35218 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpsf2O35218 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cpsf2O35218 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpsf2O35218 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpsf2O35218 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms