Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col15a1O35206 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.61■□□□□ 0.73
Col15a1O35206 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.61■□□□□ 0.73
Col15a1O35206 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col15a1O35206 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Col15a1O35206 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Gm8410-201ENSMUST00000117225 605 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 Gm11424-201ENSMUST00000121929 829 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.6■□□□□ 0.73
Col15a1O35206 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col15a1O35206 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.59■□□□□ 0.73
Col15a1O35206 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.59■□□□□ 0.73
Col15a1O35206 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col15a1O35206 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col15a1O35206 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.59■□□□□ 0.73
Col15a1O35206 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col15a1O35206 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col15a1O35206 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col15a1O35206 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col15a1O35206 Gm15487-201ENSMUST00000122373 465 ntBASIC19.58■□□□□ 0.73
Col15a1O35206 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.58■□□□□ 0.73
Col15a1O35206 Gm7775-201ENSMUST00000218871 853 ntBASIC19.58■□□□□ 0.73
Col15a1O35206 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Col15a1O35206 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col15a1O35206 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
Col15a1O35206 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Col15a1O35206 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.58■□□□□ 0.72
Col15a1O35206 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col15a1O35206 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.58■□□□□ 0.72
Col15a1O35206 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col15a1O35206 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col15a1O35206 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.57■□□□□ 0.72
Col15a1O35206 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col15a1O35206 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col15a1O35206 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.57■□□□□ 0.72
Col15a1O35206 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.57■□□□□ 0.72
Col15a1O35206 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.57■□□□□ 0.72
Col15a1O35206 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.57■□□□□ 0.72
Col15a1O35206 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col15a1O35206 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms