Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34bJ3QNR8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Gm9385-201ENSMUST00000117563 472 ntBASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Gm20553-201ENSMUST00000204205 844 ntBASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34bJ3QNR8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gm15920-201ENSMUST00000118998 402 ntBASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Rpph1-201ENSMUST00000175096 319 ntBASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34bJ3QNR8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gm44335-201ENSMUST00000196879 141 ntBASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gm44297-201ENSMUST00000198304 141 ntBASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gm44346-201ENSMUST00000198851 141 ntBASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim34bJ3QNR8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Rprl2-201ENSMUST00000157150 290 ntBASIC18.76■□□□□ 0.59
Trim34bJ3QNR8 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms