Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-3J3QMG8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Gm7153-201ENSMUST00000117092 455 ntBASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-3J3QMG8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm25990-201ENSMUST00000102440 86 ntBASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm6089-201ENSMUST00000197666 938 ntBASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm6376-201ENSMUST00000209407 580 ntBASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms