Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12-1A0N8R1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gm17808-201ENSMUST00000200859 894 ntBASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12-1A0N8R1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm10231-201ENSMUST00000181584 441 ntBASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm29518-201ENSMUST00000190858 372 ntBASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm10175-202ENSMUST00000208752 441 ntBASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-1A0N8R1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Mir3081-201ENSMUST00000175305 84 ntBASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Gm44454-201ENSMUST00000198541 138 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms