Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv29A0A0G2LB96 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Gm13312-201ENSMUST00000119631 718 ntBASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Gm45328-201ENSMUST00000210942 917 ntBASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv29A0A0G2LB96 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Gm14722-201ENSMUST00000118943 689 ntBASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv29A0A0G2LB96 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms