Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 BC037039-201ENSMUST00000192003 2205 ntBASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm18101-201ENSMUST00000215769 548 ntBASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms