Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm10013-201ENSMUST00000106074 672 ntBASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.88□□□□□ -0.51
Trav7-1A0A0G2JEV5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-1A0A0G2JEV5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm25406-201ENSMUST00000157599 105 ntBASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-1A0A0G2JEV5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms