Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm15039-201ENSMUST00000118914 875 ntBASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3n-3A0A0G2JEM0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm8520-201ENSMUST00000186517 868 ntBASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm13168-201ENSMUST00000121771 632 ntBASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm3375-201ENSMUST00000203929 796 ntBASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms