Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trbv13-3A0A0B4J1H2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms