Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv1-47A0A0A6YY41 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm25406-201ENSMUST00000157599 105 ntBASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.75□□□□□ -0.37
Ighv1-47A0A0A6YY41 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm27357-201ENSMUST00000183754 135 ntBASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms