Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm15039-201ENSMUST00000118914 875 ntBASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm9987-201ENSMUST00000069768 567 ntBASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms