Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm15378-201ENSMUST00000121894 207 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm12134-201ENSMUST00000122109 520 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16d-dv11A0A075B617 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm29707-201ENSMUST00000196325 491 ntBASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16d-dv11A0A075B617 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm18284-201ENSMUST00000172604 624 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms