Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Gm42545-201ENSMUST00000202755 922 ntBASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4n-4A0A075B615 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4n-4A0A075B615 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Gm13186-201ENSMUST00000118031 316 ntBASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.7□□□□□ -0.7
Trav4n-4A0A075B615 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms