Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdzd4Q9QY39 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdzd4Q9QY39 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Mir5126-201ENSMUST00000175513 77 ntBASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Sybu-209ENSMUST00000228639 4113 ntBASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdzd4Q9QY39 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Gm6550-201ENSMUST00000187574 993 ntBASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Gm15590-201ENSMUST00000078419 552 ntBASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdzd4Q9QY39 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Gm1401-201ENSMUST00000122048 772 ntBASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdzd4Q9QY39 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdzd4Q9QY39 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms