Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.36□□□□□ -0.27
Ssmem1Q9D9Y8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Gm18489-201ENSMUST00000172565 551 ntBASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ssmem1Q9D9Y8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gm1401-201ENSMUST00000122048 772 ntBASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gm43514-201ENSMUST00000198852 424 ntBASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gm18206-201ENSMUST00000207027 926 ntBASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gm7787-201ENSMUST00000216858 688 ntBASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.34□□□□□ -0.27
Ssmem1Q9D9Y8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ssmem1Q9D9Y8 Grk6-207ENSMUST00000225925 2769 ntBASIC13.33□□□□□ -0.27
Ssmem1Q9D9Y8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.33□□□□□ -0.28
Ssmem1Q9D9Y8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ssmem1Q9D9Y8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms