Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim13Q9CYB0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Gm30025-201ENSMUST00000218555 728 ntBASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim13Q9CYB0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim13Q9CYB0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim13Q9CYB0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms