Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Q9CR55 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q9CR55 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Q9CR55 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.39□□□□□ -0.11
Q9CR55 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.39□□□□□ -0.11
Q9CR55 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q9CR55 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Q9CR55 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.39□□□□□ -0.11
Q9CR55 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.39□□□□□ -0.11
Q9CR55 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q9CR55 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Q9CR55 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Q9CR55 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Gm715-201ENSMUST00000117865 831 ntBASIC14.38□□□□□ -0.11
Q9CR55 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.38□□□□□ -0.11
Q9CR55 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.38□□□□□ -0.11
Q9CR55 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q9CR55 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q9CR55 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Q9CR55 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Q9CR55 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.37□□□□□ -0.11
Q9CR55 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.37□□□□□ -0.11
Q9CR55 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.37□□□□□ -0.11
Q9CR55 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q9CR55 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.37□□□□□ -0.11
Q9CR55 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Q9CR55 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Q9CR55 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q9CR55 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q9CR55 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms