Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm9682-201ENSMUST00000197505 556 ntBASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sec61bQ9CQS8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm15920-201ENSMUST00000118998 402 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm22885-201ENSMUST00000157410 107 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm5682-201ENSMUST00000173402 505 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 AC154572.2-201ENSMUST00000225105 997 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 AC173482.3-201ENSMUST00000225492 1212 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm14667-201ENSMUST00000119448 1350 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm5648-201ENSMUST00000122244 1587 ntBASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Sec61bQ9CQS8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms