Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Mir7071-201ENSMUST00000184847 69 ntBASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
Lsm1Q8VC85 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm1Q8VC85 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.83□□□□□ -0.04
Lsm1Q8VC85 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Gm15165-201ENSMUST00000118140 502 ntBASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Gm13836-201ENSMUST00000121159 501 ntBASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm1Q8VC85 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Sybu-209ENSMUST00000228639 4113 ntBASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lsm1Q8VC85 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Gm25745-201ENSMUST00000174945 133 ntBASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Gm19164-201ENSMUST00000210667 640 ntBASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.81□□□□□ -0.04
Lsm1Q8VC85 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms