Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp7Q8R1T1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.7■□□□□ 0.74
Chmp7Q8R1T1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Gm18057-201ENSMUST00000208220 503 ntBASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp7Q8R1T1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp7Q8R1T1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp7Q8R1T1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Mir449b-201ENSMUST00000104833 80 ntBASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms