Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cabcoco1Q8CDT7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Mir1668-201ENSMUST00000184114 107 ntBASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Gm8520-201ENSMUST00000186517 868 ntBASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Gm5417-201ENSMUST00000079706 384 ntBASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cabcoco1Q8CDT7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Gm30025-201ENSMUST00000218555 728 ntBASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cabcoco1Q8CDT7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms