Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pabpn1Q8CCS6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Gm27631-201ENSMUST00000184163 466 ntBASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Gm7558-201ENSMUST00000193221 1165 ntBASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pabpn1Q8CCS6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gm18934-201ENSMUST00000216671 1044 ntBASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
Pabpn1Q8CCS6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 AC110817.1-201ENSMUST00000225706 605 ntBASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC23.61■■□□□ 1.37
Pabpn1Q8CCS6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Zscan30-202ENSMUST00000224144 1458 ntBASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pabpn1Q8CCS6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm12176-201ENSMUST00000121420 875 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm15593-201ENSMUST00000122085 1008 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm7446-201ENSMUST00000221035 1240 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Gm24526-201ENSMUST00000082921 158 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pabpn1Q8CCS6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pabpn1Q8CCS6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pabpn1Q8CCS6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pabpn1Q8CCS6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms