Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Gm21559-201ENSMUST00000220638 855 ntBASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Gm8587-201ENSMUST00000076538 843 ntBASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm43799-201ENSMUST00000201845 579 ntBASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Gm9987-201ENSMUST00000069768 567 ntBASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lysmd4Q8CC84 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lysmd4Q8CC84 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Gm11355-201ENSMUST00000121120 306 ntBASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Gm18101-201ENSMUST00000215769 548 ntBASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms