Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm10154-201ENSMUST00000084445 354 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a6Q8C6K9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a6Q8C6K9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a6Q8C6K9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col6a6Q8C6K9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Sybu-209ENSMUST00000228639 4113 ntBASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms