Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf38Q8BI21 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gm45328-201ENSMUST00000210942 917 ntBASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf38Q8BI21 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms