Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf168Q80XJ2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rnf168Q80XJ2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf168Q80XJ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Gm45167-201ENSMUST00000208007 322 ntBASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf168Q80XJ2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf168Q80XJ2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms