Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcd3Q6P9Z1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd3Q6P9Z1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd3Q6P9Z1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 BC037039-201ENSMUST00000192003 2205 ntBASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd3Q6P9Z1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms