Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Casc4Q6P2L7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Casc4Q6P2L7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Casc4Q6P2L7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Casc4Q6P2L7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Casc4Q6P2L7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.64■□□□□ 0.09
Casc4Q6P2L7 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.64■□□□□ 0.09
Casc4Q6P2L7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Casc4Q6P2L7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Casc4Q6P2L7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms