Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sqstm1Q64337 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gm10653-202ENSMUST00000139570 835 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.79□□□□□ -0.2
Sqstm1Q64337 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sqstm1Q64337 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Gm5643-201ENSMUST00000117081 966 ntBASIC13.78□□□□□ -0.2
Sqstm1Q64337 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sqstm1Q64337 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sqstm1Q64337 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.77□□□□□ -0.21
Sqstm1Q64337 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.77□□□□□ -0.21
Sqstm1Q64337 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sqstm1Q64337 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms