Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox17Q61473 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox17Q61473 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox17Q61473 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.53□□□□□ -0.08
Sox17Q61473 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.53□□□□□ -0.08
Sox17Q61473 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox17Q61473 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox17Q61473 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox17Q61473 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.52□□□□□ -0.08
Sox17Q61473 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox17Q61473 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.52□□□□□ -0.08
Sox17Q61473 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sox17Q61473 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox17Q61473 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Sox17Q61473 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox17Q61473 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox17Q61473 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.52□□□□□ -0.09
Sox17Q61473 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.52□□□□□ -0.09
Sox17Q61473 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.52□□□□□ -0.09
Sox17Q61473 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox17Q61473 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox17Q61473 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.51□□□□□ -0.09
Sox17Q61473 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Gm6257-201ENSMUST00000163864 910 ntBASIC14.51□□□□□ -0.09
Sox17Q61473 Gm30025-201ENSMUST00000218555 728 ntBASIC14.51□□□□□ -0.09
Sox17Q61473 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Gm7367-201ENSMUST00000057611 492 ntBASIC14.51□□□□□ -0.09
Sox17Q61473 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Sox17Q61473 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox17Q61473 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox17Q61473 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms